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Table 3 Over-represented Gene Ontology terms based on the GO assignments in the wFleaBase. In total 87,517 annotations for 13,612 genes were available

From: Transcriptional profiling of predator-induced phenotypic plasticity in Daphnia pulex

Regulation Ontologya GO ID Description Numberb GSNAP TopHat
UP BP GO:0006810 Transport 1425 18 17
UP BP GO:0006950 Response to stress 1028 14 ns
UP CC GO:0005576 Extracellular region 1024 15 14
UP MF GO:0005198 Structural molecule activity 439 9 9
UP MF GO:0005215 Transporter activity 717 13 14
UP MF GO:0016209 Antioxidant activity 121 7 8
UP MF GO:0019825 Oxygen binding 43 4 5
UP MF GO:0045735 Nutrient reservoir activity 8 4 4
DN MF GO:0030246 Carbohydrate binding 101 6 5
  1. ns — group not significantly over-represented
  2. aMF: Molecular Function, CC: Cellular Component, BP: Biological Process
  3. bTotal number of genes in the respective category