Table 3 Searching for genes putatively involved in early gametogenesis from the full-length gonad transcriptome of A. scipenserki
Gene Symbol | Gene Description | Length (bp) | NO. Unigene | NO. Unigene with ORF |
|---|---|---|---|---|
Dmrt1 | double sex and mab-3 related transcription factor 1 | 2893&3843 | 2 | 0 |
Dmrt2 | double sex and mab-3 related transcription factor 2 | 2291 | 1 | 1 |
DmrtA1 | double sex and mab-3 related transcription factor A1 | 1422–2140 | 4 | 3 |
DmrtA2 | double sex and mab-3 related transcription factor A2 | 2297–3868 | 12 | 12 |
DmrtB1 | doublesex and mab-3 related transcription factor B1 | 2325–2377 | 4 | 0 |
Amh | anti-müllerian hormone | 2071–3443 | 5 | 5 |
Foxl2 | forkhead box protein L2 | 1802–2143 | 3 | 3 |
Bmp15 | bone morphogenetic protein 15 | 1906–3389 | 11 | 7 |
Cyp19a | cytochrome P450 1A | 1757–3305 | 50 | 49 |
Ctnnb1 | catenin beta-1 | 3074–3598 | 13 | 13 |
OCT4 | POU2 | 1830–4694 | 104 | 100 |
Lhx1 | LIM homeobox 1 | 1213 | 1 | 1 |
Sf1 | steroidogenic acute regulatory protein | 2674 | 1 | 1 |
Rspo1 | R spondin 1 | 2372 | 1 | 1 |
Sox3 | SRY box 3 | 1335–3125 | 56 | 55 |
Sox4 | SRY box 4 | 2257–3666 | 5 | 4 |
Sox5 | SRY box 5 | 1500–6536 | 7 | 5 |
Sox6 | SRY box 6 | 1491 | 1 | 0 |
Sox7 | SRY box 7 | 1679–2211 | 15 | 13 |
Sox8 | SRY box 8 | 2619–3152 | 7 | 7 |
Sox9 | SRY-related HMG box gene 9 | 2657–3491 | 6 | 6 |
Sox10 | SRY box 10 | 1968 | 1 | 1 |
Sox18 | SRY box 18 | 2439 | 1 | 1 |
AR | androgen receptor | 2941–8079 | 6 | 5 |
Vasa | vasa | 2284–2876 | 30 | 27 |
ERɑ, ERβ | estrogen receptor | 1956–6770 | 17 | 11 |
Pdgfrα | platelet-derived growth factor receptor alpha | 3552 | 1 | 0 |
Hsd11b2 | 11-beta-hydroxysteroid dehydrogenase | 2243–3278 | 3 | 2 |
Lhx9 | LIM homeobox 9 | 3300&3332 | 2 | 2 |
Emx2 | homeobox protein EMX2 | 2058 | 1 | 1 |
Fshr | follicle-stimulating hormone receptor | 4201–5062 | 4 | 4 |
Gnrhr | gonadotropin-releasing hormone receptor | 815&1002 | 2 | 0 |
Igf I | insulin-like growth factor I | 2729&4884 | 2 | 2 |
Dkk1 | dickkopf-related protein 1 | 803–1948 | 9 | 7 |
Wt1 | wilms tumor protein homolog | 3322 | 1 | 1 |
Fgfr2 | fibroblast growth factor receptor 2 | 3916 | 1 | 1 |
VR | vitellogenin receptor | 1224&3294 | 2 | 1 |
Fem1 | fem-1 homolog A | 1763–4084 | 13 | 10 |
Gsdf | gonadal soma derived factor | 1602–2461 | 12 | 7 |
Spo11 | meiotic recombination protein | 1652–1797 | 5 | 3 |
Fstb2 | follistatin b2 | 3181 | 1 | 1 |
Ozf6 | oocyte zinc finger protein 6 | 1506–4396 | 47 | 35 |
Ozf7 | oocyte zinc finger protein 7 | 1487–4252 | 21 | 17 |
Ozf22 | oocyte zinc finger protein 22 | 3066 | 1 | 0 |
Hsp | heat shock protein | 479–3651 | 7 | 7 |
Hsp70 | heat shock protein 70 | 971–4279 | 64 | 59 |
Hsp75 | heat shock protein 75 | 2289–2505 | 3 | 0 |
Hsp90 | heat shock protein 90 | 403–7147 | 48 | 35 |
Kpi1 | kunitz-type protease inhibitor 1 | 2541–4371 | 13 | 10 |
Gsf1 | gametocyte-specific factor 1 | 592–6520 | 27 | 24 |
ATRX | ATRX | 1417–8148 | 21 | 16 |
Sap2 | spermatogenesis-associated protein 2 | 2141–4829 | 26 | 25 |
Sap5 | spermatogenesis-associated protein 5 | 2419–3622 | 13 | 10 |
Sap6 | spermatogenesis-associated protein 6 | 2173–4421 | 10 | 10 |
Sap7 | spermatogenesis-associated protein 7 | 1666–3201 | 14 | 11 |
Sap13 | spermatogenesis-associated protein 13 | 4707–6505 | 5 | 5 |
Sap17 | spermatogenesis-associated protein 17 | 644–2371 | 3 | 2 |
Sap20 | spermatogenesis-associated protein 20 | 3934 | 1 | 1 |
Sap22 | spermatogenesis-associated protein 22 | 1406–1699 | 4 | 3 |
Sap24 | spermatogenesis-associated protein 24 | 1691–5433 | 4 | 0 |