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Table 4 Differential expression genes (DEGs) between ovary and testis of A.schrenckii

From: Full-length transcriptome sequencing and comparative transcriptomic analysis to uncover genes involved in early gametogenesis in the gonads of Amur sturgeon (Acipenser schrenckii)

Unigene ID

Nr annotation ID

Gene symbol

Log2(OV/TE)a

FDR

Relatively higher expression in ovary

 F01_cb14613_c0/f2p1/2177

gi|742,229,200|ref.|XP_010900597.1|

Foxl2

4.52

0.0005

 F01_cb22280_c14221/f1p1/3240

gi|348,162,225|gb|AEN19340.2|

Cyp19a

5.87

5.40E-07

 F01_cb1470_c88/f1p1/2748

gi|341,579,644|gb|AEK81554.1|

OCT4

10.15

1.9E-05

 F01_cb13001_c172/f9p26/1973

gi|573,890,381|ref.|XP_006632952.1|

Sox3

11.59

2.71E-12

 F01_cb14611_c1/f1p0/2047

gi|573,875,677|ref.|XP_006626146.1|

Sox7

3.81

0.0027

 F01_cb3737_c21/f1p0/1926

gi|573,890,192|ref.|XP_006632858.1|

Bmp15

4.75

4.3E-05

 F01_cb15637_c23/f29p6/1372

gi|573,884,921|ref.|XP_006630539.1|

Dkk1

4.79

2.4E-05

 F01_cb12452_c41/f1p0/1127

gi|742,184,514|ref.|XP_010888880.1|

Gsf1

4.08

0.0023

 F01_cb8778_c103/f1p0/1710

gi|281,485,070|gb|ADA70351.1|

Hsp

3.69

0.0012

 F01_cb13963_c503/f1p126/1797

gi|393,809,558|gb|AFM75819.2|

Hsp70

7.16

2.6E-06

 F01_cb22281_c130670/f1p2/2775

gi|407,067,884|gb|AFS88930.1|

Hsp90

7.38

3.07E-08

 F01_cb15971_c8/f2p1/1691

gi|632,957,530|ref.|XP_007894530.1|

Sap24

3.48

0.0067

Relatively higher expression in testis

 F01_cb7465_c17/f5p1/2348

gi|699,584,302|ref.|XP_009864039.1|

DmrtB1

−7.16

0.0069

 F01_cb11611_c2106/f1p6/2113

gi|299,773,492|gb|ADJ38820.1|

Amh

inf b

0.0035

 F01_cb6093_c9/f1p0/2436

gi|51,599,123|gb|AAU08212.1|

Sox4

−4.33

0.0057

 F01_cb1461_c13/f1p0/2264

gi|573,890,923|ref.|XP_006633221.1|

Sox5

−6.84

0.0002

 F01_cb7554_c7/f1p0/2619

gi|410,586,767|gb|AFV74660.1|

Sox8

−4.39

0.0065

 F01_cb5663_c3/f1p0/3843

gi|634,859,782|gb|AHZ62758.1|

Sox9

−5.38

0.0003

 F01_cb6729_c44/f1p0/3330

gi|307,548,813|dbj|BAJ19133.1|

Vasa

−4.94

0.0053

 F01_cb14310_c1/f1p0/2372

gi|573,887,629|ref.|XP_006631587.1|

Rspo1

−5.86

0.0008

 F01_cb223_c11/f1p0/6792

gi|211,926,878|dbj|BAG82652.1|

ERβ

−4.55

0.0052

 F01_cb11611_c593/f1p1/1932

gi|469,923,991|emb|CCP19133.1|

Gsdf

−8.82

2E-05

 F01_cb11694_c1/f1p0/3278

gi|556,825,703|gb|AGZ80888.1|

hsd11b2

−6.49

0.0089

 F01_cb10604_c20163/f1p0/4596

gi|573,902,226|ref.|XP_006638838.1|

Fshr

−7.03

1.3E-05

 F01_cb10604_c21398/f1p1/4095

gi|573,889,889|ref.|XP_006632708.1|

ATRX

−4.87

0.0021

 F01_cb10604_c55816/f1p3/3702

gi|742,250,963|ref.|XP_010867269.1|

Ozf6

−4.22

0.0021

 F01_cb10604_c33459/f1p1/4252

gi|742,242,686|ref.|XP_010862827.1|

Ozf7

−4.77

0.0009

 F01_cb22280_c10055/f2p1/3617

gi|573,907,277|ref.|XP_006641358.1|

Sap2

−4.11

0.0043

 F01_cb22280_c4150/f1p0/3622

gi|573,881,115|ref.|XP_006628756.1|

Sap5

−6.48

0.0006

 F01_cb22282_c89869/f1p0/2184

gi|573,883,855|ref.|XP_006630079.1|

Sap6

−4.09

0.0098

  1. aThe relative expression level of genes in ovary compared to that in testis. OV ovary, TE testis
  2. b“inf” indicates tissue-specific expression pattern