Transcriptome of pleuropodia from locust embryos supports that these organs produce enzymes enabling the larva to hatch

Barbora Konopová; Elisa Buchberger; Alastair Crisp

doi:10.1186/s12983-019-0349-2

Frontiers in Zoology

Table 1 Top 10 % of the most abundant transcripts upregulated in the highly secreting pleuropodia

From: Transcriptome of pleuropodia from locust embryos supports that these organs produce enzymes enabling the larva to hatch

Transcript ID	Protein	Characteristics	Immunity^a	Cuticle digestion^b	RPKM		Fold change
Transcript ID	Protein	Characteristics	Immunity^a	Cuticle digestion^b	legs	pleuropodia	Fold change
SgreTa0017702	-				23.07	15,186.05	658.36
SgreTa0007897	C-type lysozyme	anti-bacterial protein	x		42.93	14,452.15	336.64
SgreTa0002988	Uncharacterized, contains DUF4773 domain				15.16	9112.05	601.19
SgreTa0005052	-				13.37	7950.98	594.48
SgreTa0001636	Serine protease	proteolysis	x	x	49.38	7578.31	153.48
SgreTa0008851	Chitin binding Peritrophin-A	perotrophic matrix protein			9.12	6836.42	749.88
SgreTa0017707	I-type lysozyme	anti-bacterial protein	x		12.20	6712.31	550.26
SgreTa0007042	-				7.04	6650.18	944.25
SgreTa0004599	Alpha-tocopherol transfer protein	intermembrane lipid transfer			8.99	5848.12	650.71
SgreTa0009217	-				5.03	5384.56	1070.14
SgreTa0003175	Collagen				32.25	5220.96	161.87
SgreTa0007886	Alpha-N-acetylgalactosaminidase	carbohydrate catabolism			3.85	4372.63	1134.69
SgreTa0002109	-				2.20	3016.31	1372.07
SgreTa0017715	Serine protease, Snake-like	proteolysis, Toll signaling	x	x	70.55	2947.46	41.78
SgreTa0017664	Chitinase 5	cuticular chitin degradation		x	79.32	2620.11	33.03
SgreTa0002467	Neutral endopeptidase 24.11	proteolysis		x	62.26	2282.01	36.66
SgreTa0004397	-				11.21	2266.30	202.21
SgreTa0002828	-				1.77	2188.14	1234.00
SgreTa0006539	Serpin, 88E-like	serine protease inhibitor	x		32.42	2152.14	66.38
SgreTa0001321	Glycosyl hydrolase, Myrosinase 1-like	carbohydrate catabolism			3.93	2070.40	527.16
SgreTb0011177	-				1.38	1884.79	1369.32
SgreTa0008335	-				54.24	1812.38	33.41
SgreTa0003635	Alpha-tocopherol transfer protein	intermembrane lipid transfer			2.23	1800.68	806.99
SgreTb0003860	Serine protease, H2-like	proteolysis	x	x	77.42	1727.41	22.31
SgreTa0013418	-				0.87	1484.98	1710.66
SgreTa0014009	Angiotensin-converting enzyme	proteolysis		x	65.76	1457.47	22.16
SgreTa0006966	Pro-phenol oxidase subunit 2	immunity, melanization	x		144.78	1347.43	9.31
SgreTa0000425	6-phosphofructo-2-kinase	glycolysis			93.52	1346.50	14.40
SgreTa0003661	Serine protease, Easter-like	proteolysis	x	x	29.50	1332.79	45.18
SgreTa0006960	Glutamate dehydrogenase mitochondrial	nitrogen and glutamate metabolism			172.56	1327.45	7.69
SgreTa0017670	Xaa-Pro aminopeptidase	proteolysis		x	2.89	1322.01	457.96
SgreTb0000759	Cathepsin L	proteolysis, lysosomal enzyme		x	105.63	1308.36	12.39
SgreTa0014684	-				1.30	1294.87	994.80
SgreTa0007025	Insect pheromone-binding protein A10/OS-D	chemoreception			1.77	1224.20	692.95
SgreTa0006282	Cytochrome P450 CYP4G102	synthesis of hydrocarbons, anti-dehydration			2.91	1196.27	410.93
SgreTa0009515	Sensory neuron membrane protein, 1-like	chemoreception			3.33	1188.81	357.50
SgreTa0008528	C-type lysozyme	anti-bacterial protein	x		8.61	1159.55	134.71
SgreTa0009095	Catalase	redox homeostasis	x		355.15	1158.27	3.26
SgreTb0039135	-				3.53	1119.22	316.71
SgreTa0001486	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog	lysosomal degradation			45.83	1109.33	24.20
SgreTb0039012	-				14.29	1060.82	74.25
SgreTa0009747	Serpin (27-like)	serine protease inhibitor, melanization	x		14.49	1054.67	72.80
SgreTa0013400	Peroxiredoxin, 5-llke	redox homeostasis	x		101.10	1034.15	10.23
SgreTa0017395	-				5.08	1004.86	197.64
SgreTa0017712	-				15.59	990.41	63.53
SgreTa0005600	Beta-N-acetylglucosaminidase NAG2	cuticular chitin degradation		x	15.10	939.60	62.21
SgreTa0000783	Serine protease, Snake-like	proteolysis	x	x	4.30	917.47	213.59
SgreTa0006651	Uncharacterized, contains Transcription activator MBF2 domain				1.62	907.98	561.49
SgreTa0017657	Putative serine protease, K12H4.7-like / Serine carboxypeptidase	proteolysis		x	2.31	904.26	391.60
SgreTa0017700	Peroxidase	redox homeostasis	x		5.36	874.51	163.25
SgreTa0002600	Uncharacterized, contains DUF3421 domain				0.97	870.73	894.35
SgreTb0019827	Tob	antiproliferative protein, transcription corepressor			141.26	846.86	5.99
SgreTa0017854	-				0.85	838.89	981.74
SgreTa0007774	Lysosomal-associated membrane protein	lysosomal membrane protein			185.20	822.81	4.44
SgreTa0015156	-				27.45	804.82	29.32
SgreTa0007809	Tetraspanin	scaffolding protein in cell membrane			63.04	799.76	12.69
SgreTa0004471	Leucine rich repeat	membrane glycoprotein			74.88	797.35	10.65
SgreTa0004278	Fatty acyl-CoA reductase, waterproof-like	lipid metabolism			1.75	733.39	417.99
SgreTa0014626	V-type proton ATPase proteolipid subunit	proton transporting ATPase			190.76	708.56	3.71
SgreTa0016256	Bax inhibitor 1	negative regulation of apoptosis and autophagy			237.58	692.52	2.91
SgreTa0001469	Sodium/potassium-transporting ATPase subunit alpha	sodium:potassium exchanging ATPase			119.60	685.51	5.73
SgreTa0007426	Serine protease, Easter-like	proteolysis	x	x	0.66	673.43	1023.60
SgreTa0007081	Vigilin	RNA binding, sterol metabolism			247.46	655.61	2.65
SgreTa0013328	Ferritin	iron ion transport, iron sequestration	x		238.10	651.31	2.74
SgreTa0002155	Uncharacterized serine protease inhibitor	serine protease inhibitor	x		33.83	646.73	19.12
SgreTa0014303	-				176.21	645.78	3.66
SgreTa0017577	Aquaporin	water channel			0.39	635.34	1638.96
SgreTa0013377	Phosphoenolpyruvate carboxykinase [GTP]	gluconeogenesis			13.56	628.95	46.37
SgreTa0005752	Alpha-tocopherol transfer protein	intermembrane lipid transfer			12.98	594.56	45.79
SgreTa0014098	Phospholipase B-like	lipid degradation			206.76	577.99	2.80
SgreTa0000856	Transposase-like				25.93	576.67	22.24
SgreTa0008861	-				0.37	541.63	1456.67
SgreTa0017826	Sodium:neurotransmitter symporter	solute:sodium symport			0.49	540.53	1104.10
SgreTb0019287	-				3.11	528.47	169.79
SgreTa0015520	Protein yellow	melanization	x		2.75	520.09	189.08
SgreTb0006243	I-type lysozyme	anti-bacterial protein	x		16.96	519.35	30.62
SgreTa0009559	Gram-negative bacteria binding protein 3	pathogen recognition	x		15.40	510.04	33.13

^a proteins related to immune response
^b proteins that participate in larval moulting; some of them are known, other anticipated to digest cuticular chitin and protein (e.g., present in the MF)

Back to article page

ISSN: 1742-9994

Contact us

Submission enquiries: Access here and click Contact Us
General enquiries: info@biomedcentral.com