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Table 2 Summary statistics of the DeepSuperSAGE analysis of 26 bp RNA tags after TrueQuant quality filtering (GenXPro)

From: Functional characterization of the Hyles euphorbiae hawkmoth transcriptome reveals strong expression of phorbol ester detoxification and seasonal cold hardiness genes

 

Total

In detox librariesa

In cooling librariesa

 

T

UT

C

UC

tags sequenced

12,010,268

1,331,970

2,815,748

3,378,922

4,483,628

UniTagsb

87,509

30,438

45,922

59,479

64,846

transcripts best BLASTN hit for tagsc

5489

5062

5278

differentially expressed transcriptsc

816

389

605

  1. aT TPA treated, UT untreated, C cooled, UC uncooled
  2. bNo. of unique tag sequences and the number that occurs in each library
  3. ctranscripts that where a best BLASTN hit (bit score > 40) for DeepSuperSAGE tags