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Table 3 Coverage for the selected assemblies per species, estimated as the number of reads per bp and number of reads used to build the contigs (average value and maximum and minimum values)

From: Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa

 

Reads/bp

N reads forming the contigs

 

Average

Max. Avg. Cov. (length contig bp)

Average

Min. N

Max. N

Min. N reads contigs >300bp

Petrosia ficiformis

64.7

31926.9 (309)

421.7

2

113,180

9

Crella elegans

72.7

88692.0 (238)

230.2

2

317,465

5

Cephalothrix hongkongiensis

48.7

74756.8 (337)

172.5

2

173,829

6

Cerebratulus marginatus

36.2

56724.0 (657)

208.9

2

307,273

5

Chiton olivaceus

45.2

91002.5 (217)

124.3

2

168,082

3

Octopus vulgaris

38.4

27963.1 (490)

151.0

2

65,985

3

Sipunculus nudus

92.1

123567.7 (463)

355.0

2

412,174

10

Hormogaster samnitica

40.6

85181.4 (273)

171.3

2

543,848

3

Metasiro americanus

61.3

58777.3 (201)

186.2

1

89,980

2

Alipes grandidieri

65.3

98893.9 (211)

161.8

2

153.215

2

  1. Also, the minimum number of reads used to build the contigs longer than 300 bp is given. N, number; SD, standard deviation, bp, base pairs.