Skip to main content

Table 1 Primer sequences used for RT PCR

From: Histone acetylation mediates epigenetic regulation of transcriptional reprogramming in insects during metamorphosis, wounding and infection

 

Genes

Primer sequences

1

histone deacetylase 8-forward

5`-GATACAGTGTGGTGCGGATG-3`

 

histone deacetylase 8-reverse

5`-GCAACAAGAGCAGTGATGGA-3`

2

histone deacetylase 8 isoform 2-forward

5`- TCTTCATCTTGTGGGGTTGA -3`

 

histone deacetylase 8 isoform 2-reverse

5`- GCGGGCTTCTTTAATACACG -3`

3

histone deacetylase complex subunit-forward

5`- ACTTCAGGCGAGTCCATCAG -3`

 

histone deacetylase complex subunit-reverse

5`- ACAACGAACGTTGCAGACAG -3`

4

histone deacetylase complex subunit sap18-forward

5`- GAAACTCGACGCAAAGGAAC -3`

 

histone deacetylase complex subunit sap18-reverse

5`- CTCATTGGTGGAGGCATTCT -3`

5

histone acetyltransferase 1- forward

5`- CGCATTGTGCCATTTAGTTG -3`

 

histone acetyltransferase 1- reverse

5`- TGAAGGCTTCCTGCACTGTA -3`

6

histone acetyltransferase tip60- forward

5`- CGCGAAATGGTAACAAACAG-3`

 

histone acetyltransferase tip60- reverse

5`- TGGAGAGCCACATAACAACTG -3`

7

histone acetyltransferase type b catalytic- forward

5`- CCTGAACGTTGTGGACATCA -3`

 

histone acetyltransferase type b catalytic- reverse

5`- CGCGCCTGTTTCTTGTTTAT -3`

8

MMP-I-forward

5′-CGCAGAGACGTGGACTATCA-3′

 

MMP-I-reverse

5′-CATAAGGGCAGAGCGAACAT-3′

9

IMPI-forward

5′-AGATGGCTATGCAAGGGATG-3′

 

IMPI-reverse

5′-AGGACCTGTGCAGCATTTCT-3′

10

p38 MAP kinase- forward

5’-CTGATGGCAAGAGGATTCG-3′

 

p38 MAP kinase- reverse

5’-CTTGGGACGCCTAGTCAGG-3′

11

Galiomycin-forward

5′-GGA TCC ATG GCG AAA AATTTC CAG TCC-3′

 

Galiomycin-reverse

5′-GTC GAC TTA CTCGCA CCA ACA ATT GAC GTT-3′

12

18S- forward rRNA

5′-ATGGTTGCAAAGCTGAAACT-3′

 

18S- Reverse rRNA

5′TCCCGTGTTGAGTCAAATTA-3′