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Table 1 cDNAs from GeneFishing for Trichoplusia ni.

From: Bacterial feeding induces changes in immune-related gene expression and has trans-generational impacts in the cabbage looper (Trichoplusia ni)

Cluster

Acc. No

Best BlastX match

e value

Defense and recognition

GH270329

ABQ43785: mitochondrial cyctochrome c oxidase subunit VIa [Bombyx mori]

3.00E-06

 

GH270411

ABV68856.1: gloverin [Trichoplusia ni]

2.00E-07

 

GH270330

NP_001106738: ubiquinol cytochrome c reductase [Bombyx mori]

2.00E-99

 

GH270331

NP_001037299: Mn superoxide dismutase [Bombyx mori]

9.00E-95

 

GH270389

NP_001040131.1: GST omega1 [Bombyx mori]

5.00E-52

 

GH270405

ABV68857.1: Hdd1-like protein [Trichoplusia ni]

7.00E-14

 

GH270332

P_001040251: lectin 4 C-type lectin [Bombyx mori]

1.00E-96

 

GH270378

ACC91897.1: hemolin [Heliothis virescens]

5.00E-15

 

GH270333

AQ75437: cathepsin L-like protease [Helicoverpa armigera]

7.00E-75

 

GH270348

XP_974384: PREDICTED: similar to homologue of Sarcophaga 26, 29 kDa proteinase [Tribolium castaneum]

1.00E-33

 

GH270334

NP_001106742: cytochrome c oxidase polypeptide Vb [Bombyx mori]

9.00E-47

 

GH270337

AAS79891: gst1 [Spodoptera litura]

9.00E-11

 

GH270339

P_001037057: BCP inhibitor [Bombyx mori]

2.00E-04

Development

GH270340

BAG30780: muscle protein 20 like protein [Papilio xuthus]

3.00E-09

 

GH270341

XP_001662353: hypothetical protein AaeL_AAEL012245 [Aedes aegypti], conatins chitin binding domain

4.00E-39

 

GH270382

XP_001988215: GH10690 [Drosophila grimshawi], contains chitin binding domain, Perithrophin A

5.00E-11

 

GH270345

NP_001108405: titin1 [Bombyx mori]

4.00E-05

Digestion

GH270346

AAA29341: trypsin [Manduca sexta]

3.00E-40

 

GH270365

BAD22559: lipase [Antheraea yamamai]

7.00E-50

 

GH270347

AAV91434: serine protease 3 [Lonomia obliqua]

2.00E-52

 

GH270394

P35045: Trypsin, alkaline A precursor

2.00E-39

 

GH270343

XP_972363.2: similar to trypsin-like serine protease [Tribolium castaneum]

6.00E-122

 

GH270376

XP_001650916: tyrosine-protein kinase [Aedes aegypti]

2.00E-33

DNA related

GH270368

NP_001040495: C14orf124 protein [Bombyx mori]

5.00E-20

 

GH270385

XP_001952287: PREDICTED: similar to chromosome 19 open reading frame 29 [Acyrthosiphon pisum]

6.00E-22

 

GH270400

XP_001200852: PREDICTED: similar to histone H2B (aa 1–123) [Strongylocentrotus purpuratus]

6.00E-07

Metabolism

GH270353

NP_001091831: enolase [Bombyx mori]

9.00E-58

 

GH270417

XP_001960088: GF13192 [Drosophila ananassae], similar to short-chain dehydrogenase

4.00E-23

 

GH270358

XP_552371: AGAP011872-PA [Anopheles gambiae str. PEST], ubiquitin activating enzyme

2.00E-66

 

GH270375

EEA92944.1: alcohol dehydrogenase (acceptor) [Pseudovibrio sp. JE062]

4.00E-11

 

GH270397

NP_001040294: protease inhibitor 1 [Bombyx mori]

8.00E-18

 

GH270384

NP_001037171: protein disulfide isomerase [Bombyx mori]

2.00E-100

 

GH270355

XP_396707: PREDICTED: similar to Serine/threonine-protein kinase polo [Apis mellifera]

4.00E-47

 

GH270409

NP_001040233: ATP synthase [Bombyx mori]

7.00E-146

 

GH270415

XP_001599579: PREDICTED: similar to ENSANGP00000017562 [Nasonia vitripennis], similar to stearoyl-coa desaturase

8.00E-28

 

GH270418

NP_001040310: light-induced protein-like brain protein 44 [Bombyx mori]

2.00E-34

 

GH270388

NP_001040436: hydroxysteroid dehydrogenase [Bombyx mori]

8.00E-56

 

GH270407

XP_564957: Elongase AGAP007264-PA [Anopheles gambiae str. PEST]

2.00E-45

 

GH270433

ABG77272: ubiquitin-53aa extension protein [Pieris rapae]

7.00E-05

 

GH270423

NP_001037047: silk proteinase inhibitor [Bombyx mori]

4.00E-10

 

GH270386

AAL60239: takeout [Aedes aegypti]

1.00E-08

Ribosomal protein

GH270406

ABS57435: ribosomal protein S25 [Heliconius melpomene]

1.00E-27

 

GH270431

AAK92157: ribosomal protein L14 [Spodoptera frugiperda]

4.00E-06

 

GH270381

AAN86048: ribosomal protein S2 [Spodoptera frugiperda]

4.00E-49

 

GH270374

AAL26578: ribosomal protein S3 [Spodoptera frugiperda]

1.00E-51

 

GH270396

AAV91399: ribosomal protein 27 [Lonomia obliqua]

4.00E-11

 

GH270410

NP_001091753: ribosomal protein L36A [Bombyx mori]

2.00E-29

 

GH270377

NP_001037570: ribosomal protein S15A [Bombyx mori]

2.00E-30

 

GH270416

AAV91403: ribosomal protein 5 [Lonomia obliqua]

3.00E-26

Signaling

GH270352

NP_724186: Paxillin [Drosophila melanogaster]

1.00E-111

 

GH270363

XP_974400: PREDICTED: similar to lots wife CG33968-PA, Nose resistant to flouoxetine family member [Tribolium castaneum]

8.00E-12

 

GH270422

XP_001599614.1: signal peptidase 12kda [Nasonia vitripennis]

4.00E-07

 

GH270420

NP_001040123: electron-transfer-flavoprotein beta polypeptide [Bombyx mori]

4.00E-32

Unknown

GH270366

XP_001604274.1: similar to CG12009-PA [Nasonia vitripennis]

3.00E-04

 

GH270399

XP_001121582: PREDICTED: similar to CG10710-PA [Apis mellifera]

1.00E-06

No significant match

GH270336

YP_001329156: glyoxalase/bleomycin resistance protein/dioxygenase [Sinorhizobium medicae WSM419]

e>-1

 

GH270350

XP_001421381: predicted protein [Ostreococcus lucimarinus CCE9901]

e>-1

 

GH270359

XP_001759276: predicted protein [Physcomitrella patens subsp. patens]

e>-1

 

GH270390

XP_001717683: PREDICTED: hypothetical protein [Homo sapiens]

e>-1

 

GH270429

NP_001040436: hydroxysteroid dehydrogenase [Bombyx mori]

e>-1

 

GH270401

P_001943585: PREDICTED: similar to zinc finger protein 624 [Acyrthosiphon pisum]

e>-1

 

GH270403

EAW95139.1: serine arginine repetitive matrix 1 [Homo sapiens]

e>-1

 

GH270428

YP_001744939: hypothetical protein EcSMS35_2915 [Escherichia coli SMS-3-5]

e>-1

 

GH270387

NP_927355: hypothetical protein glr4409 [Gloeobacter violaceus PCC 7421]

e>-1

 

GH270403

ZP_01465929: hypothetical protein STIAU_3143 [Stigmatella aurantiaca DW4/3-1]

e>-1

 

GH270351

BAB89324: putative G-protein coupled receptor [Homo sapiens]

e>-1

 

GH270356

XP_001647881: Gustatory receptor 61a, putative [Aedes aegypti]

e>-1

 

GH270389

ABU41034: hypothetical protein [Lepeophtheirus salmonis]

e>-1

 

GH270395

AAA26387: outer membrane protein A [Rickettsia akari]

 
 

GH270424

ZP_02747435: two-component sensor histidine kinase [Clostridium difficile QCD-63q42]

e>-1

 

GH270342

XP_001867382: myosin I [Culex pipiens quinquefasciatus]

e>-1

 

GH270362

YP_001910237: putative secretion/efflux abc transporter, ATP-binding protein [Helicobacter pylori Shi470]

e>-1

 

GH270338

CAA43583: hydroxyproline-rich glycoprotein [Oryza sativa (indica cultivar-group)]

e>-1

 

GH270335

XP_001952211: PREDICTED: similar to corneal wound healing-related protein [Acyrthosiphon pisum]

e>-1

 

GH270344

XP_001017307: Chitinase class I family protein [Tetrahymena thermophila SB210]

e>-1

 

GH270413

NP_508266: Serpentine Receptor, class H family member (srh-19) [Caenorhabditis elegans]

e>-1

 

GH270391

XP_318947: Porin AGAP009833-PA [Anopheles gambiae str. PEST]

e>-1

 

GH270404

XP_821286: hypothetical protein Tc00.1047053506401.350 [Trypanosoma cruzi strain CL Brener]

e>-1

 

GH270367

YP_812104: hypothetical protein LACR_2573 [Lactococcus lactis subsp. Cremoris SK11]

e>-1

 

GH270426

XP_001652430: hypothetical protein AaeL_AAEL001147 [Aedes aegypti]

e>-1

 

GH270432

ZP_01222271: hypothetical protein P3TCK_18689 [Photobacterium profundum 3TCK]

e>-1

 

GH270357

XP_976032: PREDICTED: hypothetical protein [Tribolium castaneum]

e>-1

Hit only against EST

GH270392

EB827756: 1151973 KZ03 Plodia interpunctella cDNA clone 584001, mRNA sequence

9.00E-08

 

GH270360

Sf1F01923-3-1 Spodoptera frugiperda Fat Body cDNA Library Spodoptera frugiperda cDNA, mRNA sequence

4.00E-12

 

GH270373

CF258147: 90 Trichoplusia ni fifth instar digestive system cDNA library Trichoplusia ni cDNA, mRNA sequence

6.00E-63

 

GH270371

EY265223: BF01036X1D07.f1 Normalized subtracted keck library BF01 Danaus plexippus cDNA clone BF01036X1D07.f1 5, mRNA sequence

8.00E-07

 

GH270425

AT001017: AT001017 Bombyx mandarina library (Hwang JS) Bombyx mandarina cDNA clone H340, mRNA sequence

2.00E-19

 

GH270354

TN-LN-384-G-03-libF_J07 Trichoplusia ni whole larvae normalized cDNA library

7.00E-85

 

GH270398

FF375565: TN-28-lipF_D07 Trichoplusia ni larval non-normalized cDNA library Trichoplusia ni cDNA clone TN-28-lipF_D07 5', mRNA sequence

6.00E-42

 

GH270412

FF377777: TN-58-pDNR-lipF_N24 Trichoplusia ni larval non-normalized cDNA library

5.00E-16

 

GH270419

FF377954:TN-60-pDNR-lipF_N13 Trichoplusia ni larval non-normalized cDNA library Trichoplusia ni cDNA clone TN-60-pDNR-lipF_N13 5', mRNA sequence

6.00E-72

 

GH270379

EX212089: EST # 0000117 Spodoptera litura oxidative-stress responsive cDNA library Spodoptera litura cDNA clone SL-470, mRNA sequence

2.00E-50

No hit at all

GH270393

No hit against EST databases as well

 
 

GH270408

No hit against EST databases as well

 
 

GH270372

No hit against EST databases as well

 
 

GH270427

No hit against EST databases as well

 
 

GH270364

No hit against EST databases as well

 
 

GH270421

No hit against EST databases as well

 
 

GH270349

No hit against EST databases as well

 
 

GH270369

No hit against EST databases as well

 
 

GH270370

No hit against EST databases as well

 
 

GH270414

No hit against EST databases as well

 
  1. Shown are the accession numbers and the best BLASTX hits with e-values for each gene. Results are divided into different clusters, based on their physiological function.