TY - BOOK AU - Brehm, A. E. PY - 1876 DA - 1876// TI - Brehm's illustrirtes Thierleben – Eine allgemeine Kunde des Thierreichs, 2. Auflage PB - Bibliographisches Institut CY - Hildburghausen ID - Brehm1876 ER - TY - CHAP AU - Corbett, G. B. AU - Hill, J. E. PY - 1992 DA - 1992// TI - Family Felidae – Cats BT - The Mammals of the Indo-Malayan Region: A systematic review PB - Oxford University Press for British Museum (Natural History) CY - London ID - Corbett1992 ER - TY - JOUR AU - Banks, E. PY - 1931 DA - 1931// TI - A popular account of the mammals of Borneo JO - J Malayan Brit Roy Asiatic Soc VL - 9 ID - Banks1931 ER - TY - CHAP AU - Pocock, R. I. PY - 1939 DA - 1939// TI - Family Felidae BT - Fauna of British India (Mammals) PB - Taylor and Francis CY - London ID - Pocock1939 ER - TY - JOUR AU - Austin, S. C. AU - Tewes, M. E. PY - 1999 DA - 1999// TI - Ecology of the clouded leopard in Khao Yai National Park, Thailand JO - Cat News/IUCN SSC VL - 31 ID - Austin1999 ER - TY - JOUR AU - Grassman, L. I. AU - Tewes, M. E. AU - Silvy, N. J. AU - Kreetiyutanont, K. PY - 2005 DA - 2005// TI - Ecology of three sympatric felids in a mixed evergreen forest in North-Central Thailand JO - J Mamm VL - 86 UR - https://doi.org/2.0.CO;2 DO - 2.0.CO;2 ID - Grassman2005 ER - TY - JOUR AU - Wilting, A. AU - Fischer, F. AU - Abu Bakar, S. AU - Linsenmair, K. E. PY - 2006 DA - 2006// TI - Clouded leopards, the secretive top-carnivore of South-East Asian rainforests: their distribution, status and conservation needs in Sabah, Malaysia JO - BMC Ecol VL - 6 UR - https://doi.org/10.1186/1472-6785-6-16 DO - 10.1186/1472-6785-6-16 ID - Wilting2006 ER - TY - JOUR AU - Pocock, R. I. PY - 1917 DA - 1917// TI - The classification of existing Felidae JO - Annals and Magazine of Natural History VL - 20 UR - https://doi.org/10.1080/00222931709487018 DO - 10.1080/00222931709487018 ID - Pocock1917 ER - TY - JOUR AU - Haltenorth, T. PY - 1936 DA - 1936// TI - Die verwandtschaftliche Stellung der Großkatzen zueinander JO - Zeitschrift fuer Saeugetierkunde VL - 11 ID - Haltenorth1936 ER - TY - JOUR AU - Hemmer, H. PY - 1964 DA - 1964// TI - Zur systematischen Stellung des Nebelparders, Neofelis nebulosa (Griffith, 1821) JO - Saeugetierkundliche Mitteilungen Muenchen VL - 12 ID - Hemmer1964 ER - TY - JOUR AU - Hemmer, H. PY - 1968 DA - 1968// TI - Studien zur Ethologie des Nebelparders Neofelis nebulosa (Griffith 1821) und des Irbis Uncia uncia (Schreber 1775) JO - Veroeffentlichungen der Zoologischen Staatssammlung Muenchen VL - 12 ID - Hemmer1968 ER - TY - JOUR AU - Yu, L. AU - Zhang, Y. P. PY - 2005 DA - 2005// TI - Phylogenetic studies of pantherine cats (Felidae) based on multiple genes, with novel application of nuclear beta-fibrinogen intron 7 to carnivores JO - Mol Phy Evol VL - 35 UR - https://doi.org/10.1016/j.ympev.2005.01.017 DO - 10.1016/j.ympev.2005.01.017 ID - Yu2005 ER - TY - JOUR AU - Johnson, W. E. AU - O'Brien, S. J. PY - 1997 DA - 1997// TI - Phylogenetic reconstruction of the Felidae using 16S rRNA and NADH-5 mitochondrial genes JO - J Mol Evol VL - 44 UR - https://doi.org/10.1007/PL00000060 DO - 10.1007/PL00000060 ID - Johnson1997 ER - TY - JOUR AU - Johnson, W. E. AU - Eizirik, E. AU - Pecon-Slattery, J. AU - Murphy, W. J. AU - Antunes, A. AU - Teeling, E. AU - O'Brien, S. J. PY - 2006 DA - 2006// TI - The late Miocene radiation of modern Felidae: a genetic assessment JO - Science VL - 311 UR - https://doi.org/10.1126/science.1122277 DO - 10.1126/science.1122277 ID - Johnson2006 ER - TY - JOUR AU - Buckley-Beason, V. A. AU - Johnson, W. E. AU - Nash, W. G. AU - Stanyon, R. AU - Menninger, J. C. AU - Driscoll, C. A. AU - Howard, J. G. AU - Bush, M. AU - Page, J. E. AU - Roelke, M. E. AU - Stone, G. AU - Martelli, P. P. AU - Wen, C. AU - Ling, L. AU - Duraisingam, R. K. AU - Lam, P. V. AU - O'Brien, S. J. PY - 2006 DA - 2006// TI - Molecular evidence for species-level distinctions in clouded leopards JO - Curr Biol VL - 16 UR - https://doi.org/10.1016/j.cub.2006.08.066 DO - 10.1016/j.cub.2006.08.066 ID - Buckley-Beason2006 ER - TY - JOUR AU - Kitchener, A. C. AU - Beaumont, M. A. AU - Richardson, D. PY - 2006 DA - 2006// TI - Geographical variation in the clouded leopard, Neofelis nebulosa, reveals two species JO - Curr Biol VL - 16 UR - https://doi.org/10.1016/j.cub.2006.10.066 DO - 10.1016/j.cub.2006.10.066 ID - Kitchener2006 ER - TY - JOUR AU - Mace, G. M. PY - 2004 DA - 2004// TI - The role of taxonomy in species conservation JO - Phil Trans Roy Soc B VL - 359 UR - https://doi.org/10.1098/rstb.2003.1454 DO - 10.1098/rstb.2003.1454 ID - Mace2004 ER - TY - JOUR AU - Bensasson, D. AU - Zhang, D. X. AU - Hartl, D. L. AU - Hewitt, G. M. PY - 2001 DA - 2001// TI - Mitochondrial pseudogenes: evolution's misplaced witnesses JO - Trends Ecol Evol VL - 16 UR - https://doi.org/10.1016/S0169-5347(01)02151-6 DO - 10.1016/S0169-5347(01)02151-6 ID - Bensasson2001 ER - TY - JOUR AU - Lopez, J. V. AU - Cevario, S. AU - O'Brien, S. J. PY - 1996 DA - 1996// TI - Complete nucleotide sequences of the domestic cat (Felis catus) mitochondrial genome and a transposed mtDNA tandem repeat (Numt) in the nuclear genome JO - Genomics VL - 33 UR - https://doi.org/10.1006/geno.1996.0188 DO - 10.1006/geno.1996.0188 ID - Lopez1996 ER - TY - JOUR AU - Lopez, J. V. AU - Yuhki, N. AU - Masuda, R. AU - Modi, W. AU - O'Brien, S. J. PY - 1994 DA - 1994// TI - Numt, a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat JO - J Mol Evol VL - 39 ID - Lopez1994 ER - TY - JOUR AU - Kim, J. H. AU - Antunes, A. AU - Luo, S. J. AU - Menninger, J. AU - Nash, W. G. AU - O'Brien, S. J. AU - Johnson, W. A. PY - 2006 DA - 2006// TI - Evolutionary analysis of a large mtDNA translocation (numt) into the nuclear genome of the Panthera genus species JO - Gene VL - 366 UR - https://doi.org/10.1016/j.gene.2005.08.023 DO - 10.1016/j.gene.2005.08.023 ID - Kim2006 ER - TY - JOUR AU - Collura, R. V. AU - Stewart, C. PY - 1995 DA - 1995// TI - Insertions and duplications of mtDNA in the nuclear genomes of Old World monkeys and hominoids JO - Nature VL - 378 UR - https://doi.org/10.1038/378485a0 DO - 10.1038/378485a0 ID - Collura1995 ER - TY - JOUR AU - Menotti-Raymond, M. AU - David, V. A. AU - Lyons, L. A. AU - Schäffer, A. A. AU - Tomlin, J. F. AU - Hutton, M. K. AU - O'Brien, S. J. PY - 1999 DA - 1999// TI - A genetic linkage map of microsatellites in the domestic cat (Felis catus) JO - Genomics VL - 57 UR - https://doi.org/10.1006/geno.1999.5743 DO - 10.1006/geno.1999.5743 ID - Menotti-Raymond1999 ER - TY - JOUR AU - Williamson, J. E. AU - Huebinger, R. M. AU - Sommer, J. A. AU - Louis, E. E. AU - Barber, R. C. PY - 2002 DA - 2002// TI - Development and cross-species amplification of 18 microsatellite markers in the Sumatran tiger (Panthera tigris sumatrae) JO - Mol Ecol Notes VL - 2 UR - https://doi.org/10.1046/j.1471-8286.2002.00163.x DO - 10.1046/j.1471-8286.2002.00163.x ID - Williamson2002 ER - TY - JOUR AU - Corander, J. AU - Waldmann, P. AU - Sillanpaa, M. J. PY - 2003 DA - 2003// TI - Bayesian analysis of genetic differentiation between populations JO - Genetics VL - 163 ID - Corander2003 ER - TY - JOUR AU - Corander, J. AU - Marttinen, P. PY - 2006 DA - 2006// TI - Bayesian identification of admixture events using multilocus molecular markers JO - Mol Ecol VL - 15 UR - https://doi.org/10.1111/j.1365-294X.2006.02994.x DO - 10.1111/j.1365-294X.2006.02994.x ID - Corander2006 ER - TY - BOOK AU - Corander, J. AU - Marttinen, P. AU - Sirén, J. AU - Tang, J. PY - 2006 DA - 2006// TI - BAPS: BayesianAnalysis of Population Structure, Manual v. 4.14 PB - Department of Mathematics and statistics CY - University of Helsinki ID - Corander2006 ER - TY - JOUR AU - Avise, J. C. AU - Ball, R. M. PY - 1990 DA - 1990// TI - Principles of genealogical concordance in species concepts and biological taxonomy JO - Oxf Surv Evol Biol VL - 7 ID - Avise1990 ER - TY - JOUR AU - O'Brien, S. J. AU - Mayr, E. PY - 1991 DA - 1991// TI - Bureaucratic mischief: recognizing endangered species and subspecies JO - Science VL - 251 UR - https://doi.org/10.1126/science.251.4998.1187 DO - 10.1126/science.251.4998.1187 ID - O'Brien1991 ER - TY - CHAP AU - Avise, J. C. PY - 1994 DA - 1994// BT - Molecular markers, natural history and evolution PB - Hall CY - New York UR - https://doi.org/10.1007/978-1-4615-2381-9 DO - 10.1007/978-1-4615-2381-9 ID - Avise1994 ER - TY - JOUR AU - Crandall, K. A. AU - Bininda-Emonds, O. R. P. AU - Mace, G. M. AU - Wayne, R. K. PY - 2000 DA - 2000// TI - Considering evolutionary processes in conservation biology JO - Trends Ecol Evol VL - 17 ID - Crandall2000 ER - TY - JOUR AU - Fraser, D. J. AU - Bernatchez, L. PY - 2001 DA - 2001// TI - Adaptive evolutionary conservation: towards a unified concept for defining conservation units JO - Mol Ecol VL - 10 UR - https://doi.org/10.1046/j.1365-294X.2001.t01-1-01411.x DO - 10.1046/j.1365-294X.2001.t01-1-01411.x ID - Fraser2001 ER - TY - JOUR AU - Ryder, O. A. PY - 1986 DA - 1986// TI - Species conservation and systematics: the dilemma of subspecies JO - Trends Ecol Evol VL - 1 UR - https://doi.org/10.1016/0169-5347(86)90059-5 DO - 10.1016/0169-5347(86)90059-5 ID - Ryder1986 ER - TY - JOUR AU - Waples, R. S. PY - 1991 DA - 1991// TI - Pacific salmon, Oncorhynchus spp. & the definition of 'species' under the endangered species act JO - Mar Fish Reviews VL - 53 ID - Waples1991 ER - TY - CHAP AU - Waples, R. S. ED - Nielson, J. L. ED - Powers, G. A. PY - 1995 DA - 1995// TI - Evolutionary significant units and the conservation of biological diversity under the endangered species act BT - Evolution and the aquatic ecosystem: Defining unique units in population conservation PB - American Fisheries Society CY - Bethesda, Maryland ID - Waples1995 ER - TY - JOUR AU - Santiapillai, C. AU - Ashby, K. R. PY - 1988 DA - 1988// TI - The Clouded leopard in Sumatra JO - Oryx VL - 22 UR - https://doi.org/10.1017/S0030605300027393 DO - 10.1017/S0030605300027393 ID - Santiapillai1988 ER - TY - CHAP PY - 2006 DA - 2006// TI - Neofelis nebulosa – status accessed 2002 BT - 2006 IUCN Red List of Threatened Species ID - ref37 ER - TY - JOUR AU - Tjia, H. D. PY - 1980 DA - 1980// TI - The Sunda shelf, Southeast Asia JO - Zeitschrift fuer Geomorphologie VL - 24 ID - Tjia1980 ER - TY - JOUR AU - Heaney, L. R. PY - 1991 DA - 1991// TI - A synopsis of climatic and vegetational change in southeast Asia JO - Climatic Change VL - 19 UR - https://doi.org/10.1007/BF00142213 DO - 10.1007/BF00142213 ID - Heaney1991 ER - TY - JOUR AU - Voris, H. K. PY - 2000 DA - 2000// TI - Maps of Pleistocene sea levels in Southeast Asia: Shorelines, river systems and time durations JO - J Biogeography VL - 27 UR - https://doi.org/10.1046/j.1365-2699.2000.00489.x DO - 10.1046/j.1365-2699.2000.00489.x ID - Voris2000 ER - TY - JOUR AU - Heaney, L. R. PY - 1985 DA - 1985// TI - Zoogeographic evidence for Middle and Late Pleistocene land bridges to the Philippine islands JO - Modern Quaternary Research SE Asia VL - 9 ID - Heaney1985 ER - TY - JOUR AU - Koopman, K. F. PY - 1989 DA - 1989// TI - Distributional patterns of the Indo-Malayan bats (Mammalia: Chiroptera) JO - Am Mus Nov VL - 2942 ID - Koopman1989 ER - TY - JOUR AU - Ruedi, M. PY - 1996 DA - 1996// TI - Phylogenetic evolution and biogeography of Southeast Asian shrews (genus Crocidura : Soricidae) JO - Biol J Linn Soc VL - 58 ID - Ruedi1996 ER - TY - JOUR AU - Karns, D. R. AU - O'Bannon, A. AU - Voris, H. K. AU - Weigt, L. A. PY - 2000 DA - 2000// TI - Biogeographical implications of mitochondrial DNA variation in the Bockadam snake (Cerberus rynchops, Serpentes: Homalopsinae) in Southeast Asia JO - J Biogeography VL - 27 UR - https://doi.org/10.1046/j.1365-2699.2000.00417.x DO - 10.1046/j.1365-2699.2000.00417.x ID - Karns2000 ER - TY - JOUR AU - Hewitt, G. PY - 2000 DA - 2000// TI - The genetic legacy of the Quaternary ice ages JO - Nature VL - 405 UR - https://doi.org/10.1038/35016000 DO - 10.1038/35016000 ID - Hewitt2000 ER - TY - JOUR AU - Inger, R. F. AU - Voris, H. K. PY - 2001 DA - 2001// TI - The biogeographical relations of the frogs and snakes of Sundaland JO - J Biogeography VL - 28 UR - https://doi.org/10.1046/j.1365-2699.2001.00580.x DO - 10.1046/j.1365-2699.2001.00580.x ID - Inger2001 ER - TY - JOUR AU - Gorog, A. J. AU - Sinaga, M. H. AU - Engstrom, M. D. PY - 2004 DA - 2004// TI - Vicariance or dispersal? Historical biogeography of three Sunda shelf murine rodents (Maxomys surifer, Leopoldamys sabanus and Maxomys whiteheadi) JO - Biol J Linn Soc VL - 81 UR - https://doi.org/10.1111/j.1095-8312.2004.00281.x DO - 10.1111/j.1095-8312.2004.00281.x ID - Gorog2004 ER - TY - JOUR AU - Brandon-Jones, D. PY - 1996 DA - 1996// TI - The Asian Colobinae (Mammalia: Cercopithecidae) as indicators of Quaternary climatic change JO - Biol J Linn Soc VL - 59 UR - https://doi.org/10.1111/j.1095-8312.1996.tb01469.x DO - 10.1111/j.1095-8312.1996.tb01469.x ID - Brandon-Jones1996 ER - TY - JOUR AU - Steiper, M. E. PY - 2006 DA - 2006// TI - Population history, biogeography, and taxonomy of orangutans (Genus: Pongo) based on a population genetic meta-analysis of multiple loci JO - J Hum Evol VL - 50 UR - https://doi.org/10.1016/j.jhevol.2005.12.005 DO - 10.1016/j.jhevol.2005.12.005 ID - Steiper2006 ER - TY - JOUR AU - Warren, K. S. AU - Verschoor, E. J. AU - Langenhuijzen, S. AU - Heryanto Swan, R. A. AU - Vigilant, L. AU - Heeney, J. L. PY - 2001 DA - 2001// TI - Speciation and intrasubspecific variation of Bornean orangutans Pongo pygmaeus pygmaeus JO - Mol Biol Evol VL - 18 UR - https://doi.org/10.1093/oxfordjournals.molbev.a003826 DO - 10.1093/oxfordjournals.molbev.a003826 ID - Warren2001 ER - TY - JOUR AU - Kanthaswamy, S. AU - Kurushima, J. D. AU - Smith, D. G. PY - 2006 DA - 2006// TI - Inferring Pongo conservation units: a perspective based on microsatellite and mitochondrial DNA analyses JO - Primates VL - 47 UR - https://doi.org/10.1007/s10329-006-0191-y DO - 10.1007/s10329-006-0191-y ID - Kanthaswamy2006 ER - TY - BOOK AU - Sambrook, J. AU - Fitsch, E. F. AU - Maniatis, T. PY - 1989 DA - 1989// TI - Molecular Cloning: A Laboratory Manual PB - Cold Spring Harbor Press CY - Cold Spring Harbor ID - Sambrook1989 ER - TY - JOUR AU - Jae-Heup, K. AU - Eizirik, E. AU - O'Brien, S. J. AU - Johnson, W. E. PY - 2001 DA - 2001// TI - Structure and patterns of sequence variation in the mitochondrial DNA control region of the great cats JO - Mitochondrion VL - 1 UR - https://doi.org/10.1016/S1567-7249(01)00027-7 DO - 10.1016/S1567-7249(01)00027-7 ID - Jae-Heup2001 ER - TY - JOUR AU - Thompson, J. D. AU - Higgins, D. G. AU - Gibson, T. J. PY - 1994 DA - 1994// TI - CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice JO - Nucleic Acids Res VL - 22 UR - https://doi.org/10.1093/nar/22.22.4673 DO - 10.1093/nar/22.22.4673 ID - Thompson1994 ER - TY - JOUR AU - Hall, T. A. PY - 1999 DA - 1999// TI - BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT JO - Nucleic Acids Symp Ser VL - 41 ID - Hall1999 ER - TY - BOOK AU - Swofford, D. L. PY - 2001 DA - 2001// TI - PAUP* phylogenetic analysis using parsimony and other methods PB - Sinauer Associates CY - Sunderland, MA ID - Swofford2001 ER - TY - JOUR AU - Huelsenbeck, J. P. AU - Bull, J. J. AU - Cunningham, C. W. PY - 1996 DA - 1996// TI - Combining data in phylogenetic analysis JO - Trends Ecol Evol VL - 11 UR - https://doi.org/10.1016/0169-5347(96)10006-9 DO - 10.1016/0169-5347(96)10006-9 ID - Huelsenbeck1996 ER - TY - JOUR AU - Eyre-Walker, A. AU - Awadalla, P. PY - 2001 DA - 2001// TI - Does human mtDNA recombine? JO - J Mol Evol VL - 51 UR - https://doi.org/10.1007/s002390010232 DO - 10.1007/s002390010232 ID - Eyre-Walker2001 ER - TY - JOUR AU - Saitou, N. AU - Nei, M. PY - 1987 DA - 1987// TI - The neighbor-joining method: A new method for reconstructing phylogenetic trees JO - Mol Biol Evol VL - 4 ID - Saitou1987 ER - TY - JOUR AU - Hasegawa, M. AU - Kishino, H. Y. T. PY - 1985 DA - 1985// TI - Dating of the human-ape splitting by a molecular clock of mitochondrial DNA JO - J Mol Evol VL - 22 UR - https://doi.org/10.1007/BF02101694 DO - 10.1007/BF02101694 ID - Hasegawa1985 ER - TY - JOUR AU - Takezaki, N. AU - Rzhetsky, A. AU - Nei, M. PY - 1995 DA - 1995// TI - Phylogenetic test of the molecular clock and linearized trees JO - Mol Biol Evol VL - 12 ID - Takezaki1995 ER - TY - JOUR AU - Kimura, M. PY - 1980 DA - 1980// TI - A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences JO - J Mol Evol VL - 16 UR - https://doi.org/10.1007/BF01731581 DO - 10.1007/BF01731581 ID - Kimura1980 ER - TY - JOUR AU - Raymond, M. AU - Rousset, F. PY - 1995 DA - 1995// TI - GENEPOP (Version 1.2): A population genetic software for exact test and ecumenicism JO - J Heredity VL - 86 ID - Raymond1995 ER - TY - JOUR AU - Excoffier, L. AU - Laval, G. AU - Schneider, S. PY - 2005 DA - 2005// TI - Arlequin (version 3.0): An integrated software package for population genetics data analysis JO - Evol Bioinformatics online VL - 1 ID - Excoffier2005 ER - TY - CHAP AU - Minch, E. AU - Ruiz-Linares, A. AU - Goldstein, D. B. PY - 1995 DA - 1995// BT - MICROSAT ID - Minch1995 ER - TY - BOOK AU - Felsenstein, J. PY - 2006 DA - 2006// TI - PHYLIP (Phylogeny inference package) version 3.66. Distributed by the author PB - Department of Genome Sciences, University of Washington CY - Seattle ID - Felsenstein2006 ER - TY - JOUR AU - Page, R. D. M. PY - 1996 DA - 1996// TI - Tree View: An application to display phylogenetic trees on personal computers JO - Comput Appl Biosc VL - 12 ID - Page1996 ER -