Table 4 Summary of dataset characteristics and sequence variation for Callicebus taxa
Dataset ID | Dataset description | Length (bp) | Missing data (%) | Constant sites | Variable sites | Parsimony informative sites | Callicebus samples | |||
|---|---|---|---|---|---|---|---|---|---|---|
bp | % of total | bp | % of total | bp | % of total | |||||
Nuclear | 20 nuclear locia | 12,778 | 13.6 | 12,387 | 96.9 | 391 | 3.1 | 293 | 2.3 | 53 samples; 47 sequenced for this study, 6 for Perelman et al. [1] |
Combined | 22 loci: 20 nucleara, COI and CYTB | 14,578 | 14.6 | 13,735 | 94.2 | 843 | 5.8 | 678 | 4.7 | |
Mitochondrial | 2 mitochondrial loci: COI and CYTB | 1,800 | 7.1 | 1,312 | 72.9 | 488 | 27.1 | 420 | 23.3 | 53 samples; 49 sequenced for this study, 4 from GenBank |